path_0_sa871path_0_sa881path_0_csa311 path_0_csa191path_0_csa201path_0_sa4581path_0_sa4591path_0_csa21path_0_sa2041path_0_sa1520path_0_sa1530path_0_sa2310 path_1_sa691path_1_sa601path_1_sa861path_1_sa881</head><body><p>Under continuous ER Ca2+ depletion, Sig-1R was triggered to dissociate from BiP to bind IP3R3 (=ITPR3) and redistribute from MAM to the entire ER network (PMID:17981125). When ER is under stress or when ER Ca2+ is depleted, SigR1 switches its interacting partner from BiP (=HSPA5=GRP78) to IP3R (=ITPR3). This process protects IP3R from degradation, resulting in restoration of Ca2+ transfer from the ER to mitochondria.(PMID:30590907) </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re42"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:30590907" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:17981125" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:10029" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_0_csa7"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_0_sa293" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_0_csa7_in_0" /><qual:input qual:qualitativeSpecies="path_0_csa30" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_0_csa7_in_1" /><qual:input 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<rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:26587781" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:10090" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:23430059" /> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_1_csa13"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa87" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa13_in_0" /><qual:input qual:qualitativeSpecies="path_1_sa82" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa13_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="path_1_csa13" qual:transitionEffect="assignmentLevel" qual:id="tr_path_1_csa13_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa87</ci><cn type="integer">1</cn></apply><apply><eq /><ci>path_1_sa82</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>IP were performed in wild-type CHO cells. Endogenous Sig-1Rs co-immunoprecipitated BiP (=HSPA5=GRP78), and conversely BiP co-immunoprecipitated endogenous Sig-1Rs. Importantly, efficient coIP of these endogenous proteins requires using lysates from MAM in which both Sig-1Rs and BiP are enriched. No other ER chaperones, including GRP94, calnexin, calreticulin, PDI, ERp57, and cyclophilin B could be detected in immunoprecipitants of endogenous Sig-1Rs, indicating a highly specific interaction between Sig-1Rs and BiP (PMID:17981125).The C-terminus of the sigma-1 receptor possesses a molecular chaperone activity that stabilizes ER proteins, thus being able to regulate their degradation. The association of another ER chaperone BiP regulates the chaperone activity of the sigma-1 receptor. The sigma-1 receptor forming a complex with BiP is in a dormant state, whereas the free sigma-1 receptor that dissociates from BiP exerts maximum chaperone activity. The association between sigma-1 receptors and BiP is Ca2+-dependent, and thus the depletion of ER Ca2+ activates the sigma-1 receptor chaperone. Importantly, even in the presence of ER Ca2+, sigma-1 receptor agonists cause the dissociation of BiP from sigma-1 receptors, leading to activation of sigma-1 receptor chaperone (25704011). When ER is under stress or when ER Ca2+ is depleted, SigR1 switches its interacting partner from BiP to IP3R. This process protects IP3R from degradation, resulting in restoration of Ca2+ transfer from the ER to mitochondria.(PMID:30590907) </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re147"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:25704011" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:30590907" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:17981125" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:10029" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_1_csa5"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa147" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa5_in_0" /><qual:input 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</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re103"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:28132811" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_0_csa8"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_0_csa7" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_0_csa8_in_0" /><qual:input qual:qualitativeSpecies="path_0_sa102" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_0_csa8_in_1" /><qual:input qual:qualitativeSpecies="path_0_csa34" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_0_csa8_in_2" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="path_0_csa8" qual:transitionEffect="assignmentLevel" 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qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa18_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="path_1_csa18" qual:transitionEffect="assignmentLevel" qual:id="tr_path_1_csa18_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa175</ci><cn type="integer">1</cn></apply><apply><eq /><ci>path_1_sa174</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>PACS-2 co-localizes with ADAM17 on early endosomes (PMID:26108729). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re152"> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:26108729" /> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_1_csa1"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa156" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa1_in_0" /><qual:input qual:qualitativeSpecies="path_1_sa158" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa1_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="path_1_csa1" qual:transitionEffect="assignmentLevel" qual:id="tr_path_1_csa1_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa156</ci><cn type="integer">1</cn></apply><apply><eq /><ci>path_1_sa158</ci><cn 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The Fis1-Bap31 complex (ARCosome) that spans the mitochondria-ER interface serves as a platform to activate the initiator procaspase-8, and thereby bridges two critical organelles for apoptosis signalling (PMID:21183955) </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re126"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:21183955" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_1_csa17"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa98" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa17_in_0" /><qual:input qual:qualitativeSpecies="path_1_sa153" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_path_1_csa17_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="path_1_csa17" qual:transitionEffect="assignmentLevel" qual:id="tr_path_1_csa17_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa98</ci><cn type="integer">1</cn></apply><apply><eq /><ci>path_1_sa153</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>MFN2 regulates shape of the ER and tethers it to mitochondria, by engaging in homo- and hetero-complexes comprising MFN2 at the ER and MFN2 or MFN1 on mitochondria. Ablation or silencing of mitofusin 2 in mouse embryonic fibroblasts and HeLa cells disrupts ER morphology and loosens ER–mitochondria interactions, thereby reducing the efficiency of mitochondrial Ca2+ uptake in response to stimuli that generate inositol-1,4,5-trisphosphate(PMID:19052620). MFN2, a dynamin-related GTPase identified at the ER surface, contributes to ER and mitochondria tethering either by homologous interaction between ER-associated MFN2 and mitochondrial MFN2 or by heterologous interaction with mitofusin 1 (MFN1), a homolog protein only located at the outer mitochondrial membrane.(PMID:29491369) </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re120"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:29491369" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:19052620" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_path_0_csa51"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_0_sa617" qual:transitionEffect="none" qual:sign="positive" 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type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>MICU1, MICU2, MCUb and EMRE were detected by protein immunoblotting after immunoprecipitation of MCU-FLAG from HEK-293T and HeLa cells.(PMID:24231807). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#path_1_re58"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:24231807" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa29"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa145" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa29_in_0" /><qual:input qual:qualitativeSpecies="sa258" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa29_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa29" qual:transitionEffect="assignmentLevel" qual:id="tr_csa29_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa145</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa258</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>The crystal structure of the receptor-binding domain (RBD) of the spike protein of SARS-CoV-2 in complex with ACE2 was determined (PMID:32225175). Biophysical and structural evidence are provided that the 2019-nCoV S protein binds angiotensin-converting enzyme 2 (ACE2) with higher affinity than does severe acute respiratory syndrome (SARS)-CoV S (PMID:32075877). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re134"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:32075877" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:32225175" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:uniprot:P0DTC2" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:2697049" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa30"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa258" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa30_in_0" /><qual:input qual:qualitativeSpecies="sa262" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa30_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa30" qual:transitionEffect="assignmentLevel" qual:id="tr_csa30_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa258</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa262</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>More than one host-cell receptor is reported to be recognized by the viral spike protein, among them is the cell-surface Heat Shock Protein A5 (HSPA5), also termed GRP78 or BiP. Upon viral infection, HSPA5 is upregulated, then translocating to the cell membrane where it is subjected to be recognized by the SARS-CoV-2 spike (PMID: 32340551). The present in silico perspective suggests the existence of a COVID-19 spike protein-GRP78 binding site. The binding is more favorable between regions III (C391-C525) and IV (C480-C488) of the spike protein model and GRP78. Region IV is the main driving force for GRP78 binding with the predicted binding affinity of -9.8 kcal/mol. These nine residues can be used to develop therapeutics specific against COVID-19 (PMID:32169481). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re135"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:32340551" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:32169481" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:uniprot:P0DTC2" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa31"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa178" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa31_in_0" /><qual:input qual:qualitativeSpecies="sa275" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa31_in_1" /><qual:input qual:qualitativeSpecies="path_1_sa180" qual:transitionEffect="none" qual:sign="negative" qual:id="tr_csa31_in_2" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa31" qual:transitionEffect="assignmentLevel" qual:id="tr_csa31_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>path_1_sa178</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa275</ci><cn type="integer">1</cn></apply><apply><eq /><ci>path_1_sa180</ci><cn type="integer">0</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>ACE2 must be cell attached to function as a SARS-CoV receptor. Soluble ACE2 was enzymatically active and partially inhibited virus entry into target cells via sACE2 competition for S protein binding. The SARS CoV spike receptor-binding domain is bound to ACE2 (PMID:19411314). 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All four proteins have at least one transmembrane domain and are abundantly expressed in infected cells. It was observed that among the four, only S activated transcription from GRP94/78 promoters to approximately fivefold. 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ADAM17 (a disintegrin and metalloproteinase 17)-mediated proteolytic cleavage of ACE2 is upregulated by endocytosed SARS-CoV-2 spike proteins (PMID:32264791). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re138"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:19411314" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:32264791" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:15983030" /> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa266"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa145" qual:transitionEffect="none" qual:sign="negative" qual:id="tr_sa266_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa266" qual:transitionEffect="assignmentLevel" qual:id="tr_sa266_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>path_1_sa145</ci><cn type="integer">0</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>Angiotensin converting enzyme-2 (ACE2) is protective but mRNA and activity are severely downregulated in both human and experimental lung fibrosis, suggesting that ACE-2 protects against lung fibrogenesis by limiting the local accumulation of the profibrotic peptide ANG II (PMID:18441099). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re139"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:18441099" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa271"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa31" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa271_in_0" /><qual:input qual:qualitativeSpecies="sa279" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa271_in_1" /><qual:input qual:qualitativeSpecies="path_1_sa180" qual:transitionEffect="none" qual:sign="negative" qual:id="tr_sa271_in_2" /><qual:input qual:qualitativeSpecies="csa30" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa271_in_3" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa271" qual:transitionEffect="assignmentLevel" qual:id="tr_sa271_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><and /><apply><eq /><ci>csa31</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa279</ci><cn type="integer">1</cn></apply></apply><apply><eq /><ci>path_1_sa180</ci><cn type="integer">0</cn></apply><apply><eq /><ci>csa30</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>ACE2 is expressed predominantly at the apical surface of human airway epithelia, facilitating SARS-CoV entry. (PMID:19411314). </p> <p>Soluble ACE2 was enzymatically active and partially inhibited virus entry into target cells via sACE2 competition for S protein binding(PMID:19411314). </p> <p>Human bronchus epithelial cells, BEAS2B, were transfected with the MERS-CoV spike and the membrane proteins evaluated. In this study GRP78 was identified as an additional binding target of the MERS-CoV spike. Further analyses indicated that GRP78 could facilitate MERS-CoV entry into permissive cells by augmenting virus attachment (PMID:29887526). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re141"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:19411314" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> <rdf:Description rdf:about="#re142"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:19411314" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:uniprot:P59594" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> <rdf:Description rdf:about="#re143"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:29887526" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:uniprot:W6A028" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:1335626" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa278"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa271" qual:transitionEffect="none" qual:sign="negative" qual:id="tr_sa278_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa278" qual:transitionEffect="assignmentLevel" qual:id="tr_sa278_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>sa271</ci><cn type="integer">0</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>ACE2 is a functional receptor for SARS-CoV. Consistent with the basal replication observed in both infection assays, minor expression of ACE2 on 293T cells was subsequently detected by an anti-ACE2 antibody (PMID:14647384). Additional data indicate that SARS-CoV S protein or SARS virus infection directly downregulates pulmonary ACE2 expression (PMID:19411314). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re144"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:14647384" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:19411314" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:uniprot:P59594" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa280"><qual:listOfInputs><qual:input qual:qualitativeSpecies="path_1_sa145" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa280_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa280" qual:transitionEffect="assignmentLevel" qual:id="tr_sa280_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>path_1_sa145</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>ACE2-transfected 293T cells supported efficient replication of SARS-CoV (PMID:14647384). </p> </body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re145"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:pubmed:14647384" /> </rdf:Bag> </bqbiol:isDescribedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource="urn:miriam:taxonomy:9606" /> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF></annotation></qual:transition></qual:listOfTransitions></model></sbml>